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3D structure

 

    2D structure of a soluble fragment of TonB:

    3D structure of a soluble fragment of TonB:

    Comparison of predictions for TonB:
    
    ........10........20........30........40........50........60
    MIMTSMTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAPAQPISVTMVTPADL
    ---EEEE-----------EEEEEHHHHHHHHHEEEEEEEEE--------EEEEEE-----  PHD
    964234167788687883378722345541112222221322799999679998427899
    CCEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC  PSIpred
    920122210235557423442200278888899871363104678854687122687656
    -----------------EEEEEE--HHHHHHHHHH----EE--------EEEEEE-----  Prof
    976544445677788864687644567888877754444446788998758998657766
    ---------------HHHHHHHHHHHHHHHHHHHH-HHHHH--------EEEEEE-----  SSpro
    ------------------------------------------------------------  JPred
    NNNNN???????????????????????????????????????????????????????  3D
    
    
    ........70........80........90.......100.......110.......120
    EPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVK
    ------------------------------------------------------------  PHD
    999999999999999999998999999999732368999999999989886768898989
    ------------------------------------------------HHHH--------  PSIpred
    787788888688708645556778787878866788456778887010221001224432
    -------------------------------EEEE-------------------------  Prof
    656565555554445555555555555544445444445555556555554456778889
    --------------------------------EE------------------------E-  SSpro
    ------------------------------------------------------------  JPred
    ????????????????????????????????????????????????????????????  3D
    
    
    .......130.......140.......150.......160.......170.......180
    PVESRPASPFENTAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPARAQALRIEGQ
    -------------------------------------------------HHHHHHH----  PHD
    999999999899998967898898899999988779986535899998168886523465
    --------------------------------HHHH---HHHH---HHHHHHHH----EE  PSIpred
    013578878888774555777343888785661001143144578611378873575228
    ------------------------------------------------HHHHHHH----E  Prof
    899999999998887655554433333445444678886557898888578998747867
    ------------------------------------------------HHHHHH----EE  SSpro
    ------------------------------------------------------------  JPred
    ????????????????????????????????????????????????-----EEEEEEE  3D
    
    
    .......190.......200.......210.......220.......230.......240
    VKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGT
    EEEEEEE------EEEEEEE---HHHHHHHHHHHHHHHHH--------EEEEEEEEE---  PHD
    599998389995323697504981489999999999975618989981579999983694
    EEEEEEE----EEEEEEEE------HHHHHHHHHHHH-----------EEEEEEEEE---  PSIpred
    899999899971889998526897067699999997064868888787269999997771
    EEEEEEEE------EEEEEE----HHHHHHHHHHHHHHHH--------EEEEEEEEE---  Prof
    999999857888657899856885578999999999987578988887689999985677
    EEEEEEE--------EEEEE---HHHHHHHHHHHHHH------------EEEEEEEE---  SSpro
    ----------------EE-----------HHHHH-------------------EEE----  JPred
    EEEEEEE-----EEEEEEE-----HHHHHHHHHHHh---------EEEEEEEEEEEEEEE  3D
    
    
    TEIQ
    -E--  PHD
    2149
    ----  PSIpred
    0279
    ----  Prof
    6679
    EE--  SSpro
    ----  JPred
    E---  3D
    
    

 

Latest update of content: June 19, 2003


Ralf Koebnik
Institut de recherche pour le dèveloppement
UMR 5096, CNRS-UP-IRD
911, Avenue Agropolis, BP 64501
34394 Montpellier, Cedex 5
FRANCE
Phone: +33 (0)4 67 41 62 28
Fax: +33 (0)4 67 41 61 81
Email: koebnik(at)gmx.de
Please replace (at) by @.


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