Given are several amino acid sequences. Find all homologous proteins in the database. If a conventional BLAST search doesn't find homologous proteins, try other search algorithms. Which ones do you consider? Xop-Proteine Protein 1 (XopA from Xanthomonas campestris pv. vesicatoria):
1 minslntshl gvdssfmqvn pdqfqkfdsn qsnqgisekq ldqlltqfif smllqddnad
61 dspnsdkptd fpsprtqmlm nvigdilqak nggrlgglsd gglntslsls gdtasmq
Protein 2 (XopB from Xanthomonas campestris pv. vesicatoria):
1 mkaeltrshs lsslerirhp esdmgndcdl evgaqpkhsg fcqsedsrlp ttrpprrrst
61 ssgatspkst vqgsghtdns gletpllisl tglqkprhmg lvrressrlv sadpvvhall
121 sfaqvdqpfp pqvastdgvr lelvsrrdpe kaleefkdaf tvetaqlmpa anssertaeq
181 idadihipll lkaiergsaa fgpsaliema dgsqisakaf lascapdvms nddvlsafin
241 qklkgdedlq vrlgaqelly vatkkefqlg glagsigvss vigsvwelga sellkkaifg
301 knfspsqyal qlagidsvpp liietmdtmc vlaiikgmkg edwslrdllp kamkagaiss
361 ivsfpnnvlq ytgfksglgd laanmtttea aifgaasgip pevkeseetm raglfqsikd
421 gvmacpsekm gpeeaieqma rhaldvapge stavksmgla aivgmiplia gskatgllse
481 kvlrifrstv fnpieaialn alalggrihv pglfesdnak harvvqtila raseqmesea
541 reitaeelhh ilaprseflr hvgtaivkgm nasfevlpal arklgygetp lnkripyqdl
601 avsntshqpa pep
Protein 3 (XopD from Xanthomonas campestris pv. vesicatoria):
1 meyipryeal ekvpvrvrfh aylrgdgsfg pglpgilrym tpdqkkrlyl aserrklala
61 apkskptpks kplkgvfrtl hqkpnlllei sskfsnrays indsssgyls qadleemvde
121 etgeltrlge avisgasqgi qtairanfrm ryqqpdlppy sppqafhrpe etwnphtpag
181 ssysslfppt psggwpqnas gewhpdtpag yshrawpaqp eassstfddl esldyrqnyg
241 yrefdlntpq eieqpgwwqq atpaqstdst fdglssmshy gsefdlnipq qeeypnnhgt
301 qtpmgysamt peridvdnlp spqdvadpel ppvratswll dghlraytdd larrlrgepn
361 ahllhfadsq vvtmlssadp dqqaraqrll agddippivf lpinqpnahw sllvvdrrnk
421 davaayhyds maqkdpqqry ladmaayhlg ldyqqthemp iaiqsdgysc gdhvltgiev
481 lahrvldgtf dyaggrdltd iepdrglird rlaqaeqapa essirqvpar sneqkkkksk
541 wwkkf
Protein 4 (XopJ from Xanthomonas campestris pv. vesicatoria):
1 mglcvskpsv agspehyaah vaeqatpsee gsgtpaqats sysatdpalq glarrgkkvd
61 lsrsglperv alktkllans lsdakdagvr ssivkygert lkmlaankqp deallkldik
121 nlpalasvyn rrypglniqh fdspidflqs lseqttsvvs qravlrlerd gehhvaadvr
181 rrpngeasvi vleparlltf vtghtqlrrq alsqlgenak fafiqvgaqk saadclmfdl
241 hfalhahqhs slfdqwhdnm vnhgtidpyg qgaaspdall edagvelmlg eqmlpaifyk
301 hthssgvvee vdrsqpgsay tdvstsgrqq qhesleqrvq afrvdrgysa sietsratki
361 rsaletaisd rqs
Letzte Aktualisierung: 3. Juli 2003 Latest update: October 15, 2009 Ralf Koebnik
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